Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm12390-201ENSMUST00000117897 397 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm27331-201ENSMUST00000183705 60 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm29127-201ENSMUST00000188304 517 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm18187-201ENSMUST00000196476 984 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm29705-201ENSMUST00000212598 474 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
E030018B13RikJ3QMS9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Gm2231-201ENSMUST00000125661 612 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
E030018B13RikJ3QMS9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
E030018B13RikJ3QMS9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms