Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcf11G3X9Z4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcf11G3X9Z4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Gm43823-201ENSMUST00000197391 1808 ntBASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Gm44967-201ENSMUST00000207047 631 ntBASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Gm13097-201ENSMUST00000210722 397 ntBASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Pcf11G3X9Z4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Gm10782-202ENSMUST00000223775 1480 ntBASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Gm7857-201ENSMUST00000117957 358 ntBASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcf11G3X9Z4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm14028-201ENSMUST00000117434 479 ntBASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm13315-201ENSMUST00000120376 991 ntBASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm14832-201ENSMUST00000121289 322 ntBASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Gm3096-201ENSMUST00000185770 364 ntBASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcf11G3X9Z4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms