Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.96□□□□□ -0.01
Syngap1F6SEU4 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syngap1F6SEU4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Syngap1F6SEU4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syngap1F6SEU4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syngap1F6SEU4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Syngap1F6SEU4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm11439-201ENSMUST00000118598 409 ntBASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Syngap1F6SEU4 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm13047-201ENSMUST00000117116 815 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Mir1943-201ENSMUST00000158276 73 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm4271-201ENSMUST00000174444 973 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm2260-201ENSMUST00000184965 657 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm10608-202ENSMUST00000213924 676 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syngap1F6SEU4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms