Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm6152-201ENSMUST00000151704 340 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4lE9Q2N0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.27□□□□□ -0.6
Cpsf4lE9Q2N0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Mir874-201ENSMUST00000104769 76 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Mir7221-201ENSMUST00000184009 72 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Gm18473-201ENSMUST00000220543 868 ntBASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cpsf4lE9Q2N0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms