Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
BC035044E0CXF8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BC035044E0CXF8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BC035044E0CXF8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BC035044E0CXF8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BC035044E0CXF8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm23935-201ENSMUST00000102303 57 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm24270-201ENSMUST00000102326 57 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm24245-201ENSMUST00000157318 57 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm22175-201ENSMUST00000175007 78 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm17837-201ENSMUST00000186435 985 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm24447-201ENSMUST00000083977 338 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.31□□□□□ -0.6
BC035044E0CXF8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
BC035044E0CXF8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Mir874-201ENSMUST00000104769 76 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm14767-201ENSMUST00000121559 586 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm5425-201ENSMUST00000214125 459 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm17795-201ENSMUST00000214505 757 ntBASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
BC035044E0CXF8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BC035044E0CXF8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BC035044E0CXF8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms