Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn1aA2APX8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Gm42693-201ENSMUST00000196779 631 ntBASIC13.9□□□□□ -0.18
Scn1aA2APX8 Gm4768-201ENSMUST00000206199 686 ntBASIC13.9□□□□□ -0.18
Scn1aA2APX8 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.9□□□□□ -0.18
Scn1aA2APX8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Gm10268-201ENSMUST00000085340 555 ntBASIC13.9□□□□□ -0.18
Scn1aA2APX8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Scn1aA2APX8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Scn1aA2APX8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.89□□□□□ -0.19
Scn1aA2APX8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Gm19931-201ENSMUST00000198920 368 ntBASIC13.89□□□□□ -0.19
Scn1aA2APX8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.89□□□□□ -0.19
Scn1aA2APX8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scn1aA2APX8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.88□□□□□ -0.19
Scn1aA2APX8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Mir8109-201ENSMUST00000184375 117 ntBASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gm38002-201ENSMUST00000193255 180 ntBASIC13.88□□□□□ -0.19
Scn1aA2APX8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1aA2APX8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms