Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Gm37935-201ENSMUST00000192012 982 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Gm10154-201ENSMUST00000084445 354 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 Gm10175-201ENSMUST00000086013 645 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.18□□□□□ -0.46
CtcflA2APF3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtcflA2APF3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CtcflA2APF3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.17□□□□□ -0.46
CtcflA2APF3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm2756-201ENSMUST00000195851 400 ntBASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.17□□□□□ -0.46
CtcflA2APF3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtcflA2APF3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtcflA2APF3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.16□□□□□ -0.46
CtcflA2APF3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CtcflA2APF3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.16□□□□□ -0.46
CtcflA2APF3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtcflA2APF3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.16□□□□□ -0.46
CtcflA2APF3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.16□□□□□ -0.46
CtcflA2APF3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.16□□□□□ -0.46
CtcflA2APF3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms