Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm5354-201ENSMUST00000182417 973 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm5161-201ENSMUST00000075243 853 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm24447-201ENSMUST00000083977 338 ntBASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.1□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12859-201ENSMUST00000117834 427 ntBASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.09□□□□□ -0.63
Lnp1A0A1B0GSK3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lnp1A0A1B0GSK3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lnp1A0A1B0GSK3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms