Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1cQ9ES64 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1cQ9ES64 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1cQ9ES64 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ush1cQ9ES64 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gm27494-201ENSMUST00000184735 189 ntBASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.26■□□□□ 0.03
Ush1cQ9ES64 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ush1cQ9ES64 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms