Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Stag1Q9D3E6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm16379-201ENSMUST00000161469 348 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm8762-201ENSMUST00000193486 339 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm38266-201ENSMUST00000194931 421 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm9257-201ENSMUST00000221254 232 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Stag1Q9D3E6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm11793-201ENSMUST00000120433 981 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm6222-202ENSMUST00000182143 629 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm3961-201ENSMUST00000204425 994 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.85■□□□□ 0.13
Stag1Q9D3E6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Gm43822-201ENSMUST00000200285 476 ntBASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.84■□□□□ 0.13
Stag1Q9D3E6 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms