Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Upk1aQ9D132 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk1aQ9D132 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk1aQ9D132 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk1aQ9D132 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk1aQ9D132 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk1aQ9D132 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm24420-201ENSMUST00000176676 59 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm7774-201ENSMUST00000200064 533 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.65□□□□□ -0.38
Upk1aQ9D132 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk1aQ9D132 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Upk1aQ9D132 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Mir449b-201ENSMUST00000104833 80 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm27622-201ENSMUST00000183779 60 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm27533-201ENSMUST00000183800 152 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm10766-202ENSMUST00000194123 606 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm5312-201ENSMUST00000203728 547 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk1aQ9D132 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.64□□□□□ -0.39
Upk1aQ9D132 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk1aQ9D132 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms