Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Gm43056-201ENSMUST00000197865 2791 ntBASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Mrpl55Q9CZ83 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm5639-201ENSMUST00000122305 2403 ntBASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm25144-201ENSMUST00000179561 110 ntBASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm25352-201ENSMUST00000179815 110 ntBASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm9182-201ENSMUST00000217829 639 ntBASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm18041-201ENSMUST00000218210 618 ntBASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Mrpl55Q9CZ83 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Gm6756-201ENSMUST00000180647 1620 ntBASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Mrpl55Q9CZ83 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms