Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb1Q9CQ70 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
H2afb1Q9CQ70 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb1Q9CQ70 Gm5161-201ENSMUST00000075243 853 ntBASIC10.96□□□□□ -0.65
H2afb1Q9CQ70 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afb1Q9CQ70 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afb1Q9CQ70 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm9522-201ENSMUST00000182394 926 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm38144-201ENSMUST00000192790 465 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm45841-201ENSMUST00000207700 164 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afb1Q9CQ70 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm27989-201ENSMUST00000184721 107 ntBASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm20445-201ENSMUST00000061905 565 ntBASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.94□□□□□ -0.66
H2afb1Q9CQ70 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms