Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Gm37497-201ENSMUST00000195830 798 ntBASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Gm45865-201ENSMUST00000211815 945 ntBASIC10.96□□□□□ -0.65
Prpf8Q99PV0 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prpf8Q99PV0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Mir698-201ENSMUST00000102164 109 ntBASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Gm11793-201ENSMUST00000120433 981 ntBASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Gm38341-201ENSMUST00000195357 515 ntBASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prpf8Q99PV0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.95□□□□□ -0.66
Prpf8Q99PV0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.95□□□□□ -0.66
Prpf8Q99PV0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Gm16372-201ENSMUST00000073088 450 ntBASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prpf8Q99PV0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm13786-201ENSMUST00000122371 333 ntBASIC10.94□□□□□ -0.66
Prpf8Q99PV0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.94□□□□□ -0.66
Prpf8Q99PV0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms