Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm22189-201ENSMUST00000103822 86 ntBASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim11Q99PQ2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm15376-201ENSMUST00000122258 783 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm45841-201ENSMUST00000207700 164 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Syt7-205ENSMUST00000224135 1557 ntBASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim11Q99PQ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Mir7221-201ENSMUST00000184009 72 ntBASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim11Q99PQ2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim11Q99PQ2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms