Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Matn2-206ENSMUST00000228570 2798 ntBASIC13.25□□□□□ -0.29
Cdh23Q99PF4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm8894-201ENSMUST00000074642 666 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm11941-201ENSMUST00000119904 610 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm14704-201ENSMUST00000120300 874 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm29615-201ENSMUST00000185371 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28224-201ENSMUST00000186078 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm29001-201ENSMUST00000186177 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28292-201ENSMUST00000186593 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28101-201ENSMUST00000187608 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm29076-201ENSMUST00000187689 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28302-201ENSMUST00000187931 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28646-201ENSMUST00000188220 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28205-201ENSMUST00000189177 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm29032-201ENSMUST00000189797 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm28695-201ENSMUST00000190300 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm37448-201ENSMUST00000192795 697 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm37028-201ENSMUST00000194276 107 ntBASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdh23Q99PF4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Mir1901-201ENSMUST00000122616 78 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm8492-201ENSMUST00000182375 987 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm5904-201ENSMUST00000210286 865 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm45598-202ENSMUST00000210719 986 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm15432-201ENSMUST00000121106 195 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Gm22058-201ENSMUST00000083393 310 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms