Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gtf2ird2Q99NI3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gtf2ird2Q99NI3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gtf2ird2Q99NI3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gtf2ird2Q99NI3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms