Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp1b1Q99LU0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm27437-201ENSMUST00000183429 107 ntBASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm44719-201ENSMUST00000206404 149 ntBASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp1b1Q99LU0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp1b1Q99LU0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Gm18905-201ENSMUST00000205454 928 ntBASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp1b1Q99LU0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms