Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Clip1Q922J3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.73■□□□□ 0.91
Clip1Q922J3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC20.73■□□□□ 0.91
Clip1Q922J3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.73■□□□□ 0.91
Clip1Q922J3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Gm10729-202ENSMUST00000193403 1375 ntBASIC20.73■□□□□ 0.91
Clip1Q922J3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm38157-201ENSMUST00000194178 1698 ntBASIC20.72■□□□□ 0.91
Clip1Q922J3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip1Q922J3 Mir3102-201ENSMUST00000175555 104 ntBASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC20.72■□□□□ 0.91
Clip1Q922J3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC20.72■□□□□ 0.91
Clip1Q922J3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Gm7993-201ENSMUST00000200970 1384 ntBASIC20.71■□□□□ 0.91
Clip1Q922J3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC20.71■□□□□ 0.91
Clip1Q922J3 Il17rd-203ENSMUST00000225146 3366 ntBASIC20.71■□□□□ 0.91
Clip1Q922J3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Clip1Q922J3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
Clip1Q922J3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Clip1Q922J3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Clip1Q922J3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC20.71■□□□□ 0.91
Clip1Q922J3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clip1Q922J3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip1Q922J3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.7■□□□□ 0.9
Clip1Q922J3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm14704-201ENSMUST00000120300 874 ntBASIC20.7■□□□□ 0.9
Clip1Q922J3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm25668-201ENSMUST00000157700 129 ntBASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm37466-201ENSMUST00000195692 652 ntBASIC20.7■□□□□ 0.9
Clip1Q922J3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip1Q922J3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clip1Q922J3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms