Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.42■□□□□ 0.06
Smc1bQ920F6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1bQ920F6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm27772-201ENSMUST00000184900 187 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm44608-201ENSMUST00000206827 855 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Gm18027-201ENSMUST00000218947 619 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.41■□□□□ 0.06
Smc1bQ920F6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1bQ920F6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm11803-201ENSMUST00000119966 444 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm13385-201ENSMUST00000121089 220 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm7783-201ENSMUST00000204795 781 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm24526-201ENSMUST00000082921 158 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.4■□□□□ 0.06
Smc1bQ920F6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1bQ920F6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms