Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm20949-201ENSMUST00000206478 952 ntBASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb8Q91XZ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gm14057-201ENSMUST00000120631 482 ntBASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gm24447-201ENSMUST00000083977 338 ntBASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb8Q91XZ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm15678-201ENSMUST00000117573 960 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm26464-201ENSMUST00000157094 305 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Pcdhb8Q91XZ2 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms