Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Gm11478-201ENSMUST00000117851 599 ntBASIC13.24□□□□□ -0.29
Usb1Q91W78 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Gm27772-201ENSMUST00000184900 187 ntBASIC13.24□□□□□ -0.29
Usb1Q91W78 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.24□□□□□ -0.29
Usb1Q91W78 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Usb1Q91W78 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Usb1Q91W78 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Usb1Q91W78 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.24□□□□□ -0.29
Usb1Q91W78 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Usb1Q91W78 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.24□□□□□ -0.29
Usb1Q91W78 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Usb1Q91W78 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usb1Q91W78 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm12341-201ENSMUST00000119724 503 ntBASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm11918-201ENSMUST00000121660 179 ntBASIC13.23□□□□□ -0.29
Usb1Q91W78 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.23□□□□□ -0.29
Usb1Q91W78 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm45384-201ENSMUST00000210451 277 ntBASIC13.23□□□□□ -0.29
Usb1Q91W78 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.23□□□□□ -0.29
Usb1Q91W78 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usb1Q91W78 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.22□□□□□ -0.29
Usb1Q91W78 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.22□□□□□ -0.29
Usb1Q91W78 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.22□□□□□ -0.29
Usb1Q91W78 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.22□□□□□ -0.29
Usb1Q91W78 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.22□□□□□ -0.29
Usb1Q91W78 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.22□□□□□ -0.29
Usb1Q91W78 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Usb1Q91W78 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usb1Q91W78 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms