Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup85Q8R480 Gm18307-201ENSMUST00000206864 949 ntBASIC13.75□□□□□ -0.21
Nup85Q8R480 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup85Q8R480 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Nup85Q8R480 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup85Q8R480 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Nup85Q8R480 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup85Q8R480 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm9002-201ENSMUST00000178437 499 ntBASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm28911-201ENSMUST00000188837 117 ntBASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup85Q8R480 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup85Q8R480 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.74□□□□□ -0.21
Nup85Q8R480 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup85Q8R480 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup85Q8R480 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup85Q8R480 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nup85Q8R480 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup85Q8R480 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup85Q8R480 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nup85Q8R480 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Gm15678-201ENSMUST00000117573 960 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.73□□□□□ -0.21
Nup85Q8R480 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.73□□□□□ -0.21
Nup85Q8R480 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup85Q8R480 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup85Q8R480 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms