Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Gm9229-201ENSMUST00000222777 126 ntBASIC14.34□□□□□ -0.11
Nup58Q8R332 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.34□□□□□ -0.11
Nup58Q8R332 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup58Q8R332 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup58Q8R332 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup58Q8R332 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm15393-201ENSMUST00000120499 219 ntBASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm16215-201ENSMUST00000161990 637 ntBASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.33□□□□□ -0.12
Nup58Q8R332 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Syt7-204ENSMUST00000223586 1344 ntBASIC14.33□□□□□ -0.12
Nup58Q8R332 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup58Q8R332 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Nup58Q8R332 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.32□□□□□ -0.12
Nup58Q8R332 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.32□□□□□ -0.12
Nup58Q8R332 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.32□□□□□ -0.12
Nup58Q8R332 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Gm6912-201ENSMUST00000117218 544 ntBASIC14.32□□□□□ -0.12
Nup58Q8R332 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.32□□□□□ -0.12
Nup58Q8R332 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Gm10766-202ENSMUST00000194123 606 ntBASIC14.32□□□□□ -0.12
Nup58Q8R332 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup58Q8R332 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.32□□□□□ -0.12
Nup58Q8R332 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup58Q8R332 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nup58Q8R332 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup58Q8R332 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms