Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm15823-201ENSMUST00000064305 670 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.6□□□□□ -0.39
Clrn1Q8K445 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.6□□□□□ -0.39
Clrn1Q8K445 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.6□□□□□ -0.39
Clrn1Q8K445 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.6□□□□□ -0.39
Clrn1Q8K445 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Clrn1Q8K445 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.59□□□□□ -0.39
Clrn1Q8K445 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm38223-201ENSMUST00000194484 695 ntBASIC12.59□□□□□ -0.39
Clrn1Q8K445 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.59□□□□□ -0.39
Clrn1Q8K445 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.59□□□□□ -0.39
Clrn1Q8K445 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clrn1Q8K445 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn1Q8K445 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn1Q8K445 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.58□□□□□ -0.39
Clrn1Q8K445 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn1Q8K445 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms