Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox30Q8CGW4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox30Q8CGW4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm12485-201ENSMUST00000119641 291 ntBASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm43514-201ENSMUST00000198852 424 ntBASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sox30Q8CGW4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sox30Q8CGW4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox30Q8CGW4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Sox30Q8CGW4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Gm15376-201ENSMUST00000122258 783 ntBASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Gm21854-201ENSMUST00000179901 471 ntBASIC14.58□□□□□ -0.08
Sox30Q8CGW4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox30Q8CGW4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm22175-201ENSMUST00000175007 78 ntBASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm29608-201ENSMUST00000190444 463 ntBASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm19078-201ENSMUST00000206311 727 ntBASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox30Q8CGW4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms