Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Brf1Q8CFK2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gm12490-201ENSMUST00000120255 560 ntBASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gm45841-201ENSMUST00000207700 164 ntBASIC16.11■□□□□ 0.17
Brf1Q8CFK2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Brf1Q8CFK2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Gm6447-201ENSMUST00000118905 835 ntBASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Brf1Q8CFK2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.09■□□□□ 0.17
Brf1Q8CFK2 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Brf1Q8CFK2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms