Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28aQ8CEI3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28aQ8CEI3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc28aQ8CEI3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28aQ8CEI3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28aQ8CEI3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28aQ8CEI3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28aQ8CEI3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm27772-201ENSMUST00000184900 187 ntBASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28aQ8CEI3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms