Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim9Q8C7M3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gm6447-201ENSMUST00000118905 835 ntBASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.73□□□□□ -0.05
Trim9Q8C7M3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim9Q8C7M3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim9Q8C7M3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.72□□□□□ -0.05
Trim9Q8C7M3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim9Q8C7M3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms