Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm12151-201ENSMUST00000121374 290 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Mir8102-201ENSMUST00000184148 139 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm9063-201ENSMUST00000223299 582 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rft1Q8C3B8 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 BC001981-202ENSMUST00000191393 1545 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm12882-201ENSMUST00000121696 517 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm46209-201ENSMUST00000217912 553 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rft1Q8C3B8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rft1Q8C3B8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rft1Q8C3B8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rft1Q8C3B8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rft1Q8C3B8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rft1Q8C3B8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms