Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm22018-201ENSMUST00000104357 131 ntBASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Olfr582-201ENSMUST00000098212 960 ntBASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf2Q8BZT2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm38002-201ENSMUST00000193255 180 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm19309-201ENSMUST00000218295 205 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Snora73a-201ENSMUST00000082453 205 ntBASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf2Q8BZT2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sh3rf2Q8BZT2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms