Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm5051-201ENSMUST00000204085 485 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col16a1Q8BLX7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Gm9555-201ENSMUST00000200908 583 ntBASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Gm39404-201ENSMUST00000216350 313 ntBASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col16a1Q8BLX7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm6335-201ENSMUST00000118081 1194 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm7816-201ENSMUST00000119884 1194 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm15542-201ENSMUST00000121585 1194 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Mir339-201ENSMUST00000083659 96 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col16a1Q8BLX7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 D9Wsu149-201ENSMUST00000214169 594 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Gm44094-201ENSMUST00000204703 2030 ntBASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms