Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm21854-201ENSMUST00000179901 471 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm10766-202ENSMUST00000194123 606 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm37714-201ENSMUST00000194742 342 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm18027-201ENSMUST00000218947 619 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Gm9797-201ENSMUST00000052902 613 ntBASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh20Q8BIZ0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Gm6218-201ENSMUST00000219812 628 ntBASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh20Q8BIZ0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms