Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm6888-201ENSMUST00000221983 706 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Gm12585-201ENSMUST00000117307 290 ntBASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Gm13453-201ENSMUST00000118708 357 ntBASIC12.91□□□□□ -0.34
Rnf38Q8BI21 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.91□□□□□ -0.34
Rnf38Q8BI21 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf38Q8BI21 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Paupar-201ENSMUST00000194826 3482 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm13223-201ENSMUST00000118609 747 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm14767-201ENSMUST00000121559 586 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm24420-201ENSMUST00000176676 59 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm27321-201ENSMUST00000185021 205 ntBASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms