Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Depdc1bQ8BH88 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Depdc1bQ8BH88 Gm12341-201ENSMUST00000119724 503 ntBASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm15806-201ENSMUST00000120696 955 ntBASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm27772-201ENSMUST00000184900 187 ntBASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Depdc1bQ8BH88 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Gm9002-201ENSMUST00000178437 499 ntBASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Gm27701-201ENSMUST00000184498 110 ntBASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Depdc1bQ8BH88 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms