Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm22171-201ENSMUST00000179283 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm23936-201ENSMUST00000179354 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm22619-201ENSMUST00000179516 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25255-201ENSMUST00000179579 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24755-201ENSMUST00000179691 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm26506-201ENSMUST00000179692 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25086-201ENSMUST00000179931 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm23243-201ENSMUST00000180047 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24659-201ENSMUST00000180212 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24169-201ENSMUST00000180244 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm23689-201ENSMUST00000180354 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm27359-201ENSMUST00000184153 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm27785-201ENSMUST00000184268 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm27466-201ENSMUST00000184396 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm27703-201ENSMUST00000184836 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm44335-201ENSMUST00000196879 141 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm44297-201ENSMUST00000198304 141 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm44346-201ENSMUST00000198851 141 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm12428-201ENSMUST00000119844 727 ntBASIC14.19□□□□□ -0.14
Trim6Q8BGE7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm21470-201ENSMUST00000187680 696 ntBASIC14.19□□□□□ -0.14
Trim6Q8BGE7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.19□□□□□ -0.14
Trim6Q8BGE7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim6Q8BGE7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm15460-201ENSMUST00000118147 391 ntBASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.18□□□□□ -0.14
Trim6Q8BGE7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim6Q8BGE7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms