Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim50Q810I2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim50Q810I2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim50Q810I2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim50Q810I2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim50Q810I2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim50Q810I2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Mir7654-201ENSMUST00000185082 70 ntBASIC13.02□□□□□ -0.33
Trim50Q810I2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim50Q810I2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Gm15823-201ENSMUST00000064305 670 ntBASIC13.02□□□□□ -0.33
Trim50Q810I2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim50Q810I2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim50Q810I2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim50Q810I2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.02□□□□□ -0.33
Trim50Q810I2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.02□□□□□ -0.33
Trim50Q810I2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim50Q810I2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.02□□□□□ -0.33
Trim50Q810I2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.02□□□□□ -0.33
Trim50Q810I2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim50Q810I2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim50Q810I2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.01□□□□□ -0.33
Trim50Q810I2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.01□□□□□ -0.33
Trim50Q810I2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trim50Q810I2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.01□□□□□ -0.33
Trim50Q810I2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.01□□□□□ -0.33
Trim50Q810I2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.01□□□□□ -0.33
Trim50Q810I2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim50Q810I2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim50Q810I2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13□□□□□ -0.33
Trim50Q810I2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13□□□□□ -0.33
Trim50Q810I2 Gm38144-201ENSMUST00000192790 465 ntBASIC13□□□□□ -0.33
Trim50Q810I2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trim50Q810I2 Gm45668-201ENSMUST00000211271 493 ntBASIC13□□□□□ -0.33
Trim50Q810I2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13□□□□□ -0.33
Trim50Q810I2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13□□□□□ -0.33
Trim50Q810I2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim50Q810I2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Trim50Q810I2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim50Q810I2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13□□□□□ -0.33
Trim50Q810I2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms