Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm8810-201ENSMUST00000172895 754 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm7561-201ENSMUST00000211203 886 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm6091-201ENSMUST00000098307 165 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13□□□□□ -0.33
Lrrtm4Q80XG9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lrrtm4Q80XG9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.98□□□□□ -0.33
Lrrtm4Q80XG9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms