Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vrk1Q80X41 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm16372-201ENSMUST00000073088 450 ntBASIC12.75□□□□□ -0.37
Vrk1Q80X41 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.75□□□□□ -0.37
Vrk1Q80X41 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vrk1Q80X41 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.75□□□□□ -0.37
Vrk1Q80X41 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gm22018-201ENSMUST00000104357 131 ntBASIC12.74□□□□□ -0.37
Vrk1Q80X41 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.74□□□□□ -0.37
Vrk1Q80X41 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.74□□□□□ -0.37
Vrk1Q80X41 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.74□□□□□ -0.37
Vrk1Q80X41 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms