Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm29608-201ENSMUST00000190444 463 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh8Q7TSK3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Gm11803-201ENSMUST00000119966 444 ntBASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh8Q7TSK3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh8Q7TSK3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms