Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf139Q7TMV1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf139Q7TMV1 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Mir7221-201ENSMUST00000184009 72 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf139Q7TMV1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gm7287-201ENSMUST00000205267 602 ntBASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.26□□□□□ -0.13
Rnf139Q7TMV1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Mir874-201ENSMUST00000104769 76 ntBASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Gm13612-201ENSMUST00000119276 390 ntBASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Gm11424-201ENSMUST00000121929 829 ntBASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf139Q7TMV1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms