Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.21□□□□□ -0.13
CtifQ6PEE2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Mir698-201ENSMUST00000102164 109 ntBASIC14.21□□□□□ -0.13
CtifQ6PEE2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CtifQ6PEE2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.21□□□□□ -0.14
CtifQ6PEE2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC14.21□□□□□ -0.14
CtifQ6PEE2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CtifQ6PEE2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
CtifQ6PEE2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Gm13597-201ENSMUST00000121239 375 ntBASIC14.2□□□□□ -0.14
CtifQ6PEE2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.2□□□□□ -0.14
CtifQ6PEE2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CtifQ6PEE2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.19□□□□□ -0.14
CtifQ6PEE2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.19□□□□□ -0.14
CtifQ6PEE2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CtifQ6PEE2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms