Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm26956-201ENSMUST00000182176 986 ntBASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm37042-201ENSMUST00000193816 581 ntBASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm31256-201ENSMUST00000194705 506 ntBASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.71□□□□□ -0.54
Snrnp40Q6PE01 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm22902-201ENSMUST00000158488 302 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm17208-201ENSMUST00000168388 535 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm27341-201ENSMUST00000183570 106 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm45186-201ENSMUST00000206874 478 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Snrnp40Q6PE01 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm12502-201ENSMUST00000120197 444 ntBASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Snrnp40Q6PE01 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms