Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Kdm3aQ6PCM1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Gm17420-201ENSMUST00000164753 153 ntBASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Kdm3aQ6PCM1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Kdm3aQ6PCM1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Mir686-201ENSMUST00000102174 109 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm23931-201ENSMUST00000103842 109 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm8805-201ENSMUST00000117848 313 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm26185-201ENSMUST00000157692 266 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm43630-201ENSMUST00000201550 776 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Kdm3aQ6PCM1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms