Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Gm13689-201ENSMUST00000119360 685 ntBASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.53□□□□□ -0.24
Casc4Q6P2L7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Casc4Q6P2L7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Casc4Q6P2L7 Gm15678-201ENSMUST00000117573 960 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm12138-201ENSMUST00000122180 951 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm29608-201ENSMUST00000190444 463 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm38144-201ENSMUST00000192790 465 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Grk6-205ENSMUST00000224653 2976 ntBASIC13.52□□□□□ -0.25
Casc4Q6P2L7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm11424-201ENSMUST00000121929 829 ntBASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.51□□□□□ -0.25
Casc4Q6P2L7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms