Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sp140Q6NSQ5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Syt7-205ENSMUST00000224135 1557 ntBASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm14057-201ENSMUST00000120631 482 ntBASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm44855-201ENSMUST00000205725 362 ntBASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sp140Q6NSQ5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms