Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm12928-201ENSMUST00000117115 573 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm15770-201ENSMUST00000117498 584 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm6244-201ENSMUST00000178732 841 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm27892-201ENSMUST00000185017 106 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm29608-201ENSMUST00000190444 463 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm18041-201ENSMUST00000218210 618 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Grk6-205ENSMUST00000224653 2976 ntBASIC12.87□□□□□ -0.35
Sdc3Q64519 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sdc3Q64519 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sdc3Q64519 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sdc3Q64519 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.86□□□□□ -0.35
Sdc3Q64519 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sdc3Q64519 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.86□□□□□ -0.35
Sdc3Q64519 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sdc3Q64519 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.85□□□□□ -0.35
Sdc3Q64519 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Sdc3Q64519 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sdc3Q64519 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms