Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim28Q62318 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim28Q62318 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim28Q62318 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim28Q62318 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim28Q62318 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim28Q62318 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Mospd4-201ENSMUST00000180618 576 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim28Q62318 Gm38266-201ENSMUST00000194931 421 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Gm38092-201ENSMUST00000195600 653 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Gm3961-201ENSMUST00000204425 994 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Gm7783-201ENSMUST00000204795 781 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim28Q62318 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim28Q62318 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim28Q62318 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim28Q62318 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim28Q62318 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trim28Q62318 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.19■□□□□ 0.34
Trim28Q62318 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim28Q62318 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Mir874-201ENSMUST00000104769 76 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm12291-201ENSMUST00000121627 311 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Gm7584-201ENSMUST00000175829 940 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm37259-201ENSMUST00000193903 849 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm8099-201ENSMUST00000200510 742 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 Gm6334-201ENSMUST00000207083 228 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Gm9257-201ENSMUST00000221254 232 ntBASIC17.18■□□□□ 0.34
Trim28Q62318 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim28Q62318 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Trim28Q62318 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim28Q62318 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Trim28Q62318 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim28Q62318 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim28Q62318 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim28Q62318 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Trim28Q62318 Gm6621-201ENSMUST00000193251 772 ntBASIC17.17■□□□□ 0.34
Trim28Q62318 Gm43822-201ENSMUST00000200285 476 ntBASIC17.17■□□□□ 0.34
Trim28Q62318 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim28Q62318 Gm10608-202ENSMUST00000213924 676 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms