Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Sox17Q61473 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.51□□□□□ -0.41
Sox17Q61473 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Gm9719-201ENSMUST00000162765 543 ntBASIC12.51□□□□□ -0.41
Sox17Q61473 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sox17Q61473 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox17Q61473 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sox17Q61473 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox17Q61473 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox17Q61473 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Sox17Q61473 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm5566-201ENSMUST00000116118 459 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm18733-201ENSMUST00000173950 856 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox17Q61473 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox17Q61473 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.5□□□□□ -0.41
Sox17Q61473 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox17Q61473 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox17Q61473 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox17Q61473 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox17Q61473 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.49□□□□□ -0.41
Sox17Q61473 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox17Q61473 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Rprl2-201ENSMUST00000157150 290 ntBASIC12.49□□□□□ -0.41
Sox17Q61473 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sox17Q61473 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms