Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm34391-201ENSMUST00000203706 907 ntBASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm18195-201ENSMUST00000207604 706 ntBASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm9182-201ENSMUST00000217829 639 ntBASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm9726-201ENSMUST00000180321 678 ntBASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm10060-201ENSMUST00000212002 111 ntBASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-3Q5R1C3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm7153-201ENSMUST00000117092 455 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm13464-201ENSMUST00000119418 935 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm6184-201ENSMUST00000120403 1261 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms